Identification and Affinity Determination of Antibody Epitopes against the Chemokine CXCL8 by High-Pressure Proteolytic Extraction Mass Spectrometry and Biosensor Analysis

Identification and Affinity Determination of Antibody Epitopes against the Chemokine CXCL8 by High-Pressure Proteolytic Extraction Mass Spectrometry and Biosensor Analysis

CXCL8 (Interleukin8) is a72 amino acid chemokine that plays an important role in immunological and inflammatory processes and is involved in Rheumatoid arthritis and cancer. [1,2] An inhibiting effect of a commercially available humanized monoclonal anti-XCL8 antibody for the CXCL8:CXCR1 interaction was observed in cell assays but the specific binding site(epitope)was still unknown. [3]

Earlier studies showed that the CXCL8 binding sites to CXCR1 are the N-Terminus,30S-Loop and N-Loop (fig.1). [3,4] The knowledge about the epitope could give insights into the mechanism and contribute to the development of new drugs. For digestion of the CXCL8 a standard method and a high-pressure (HP) method are compared. The HP method should enhance digestion times and help by the digestion of very stable proteins combined with the same enzyme specificity